Software

FuMo

submitted to Bioinformatics

Functional Modules integrating essential cellular functions are predictive of the response of leukaemia cells to DNA damage

Supplementary Material

Quick Tutorial (pdf)
R Documentation (pdf)
Supplementary Material (pdf)
README for Ionizing Radiation Dataset (TXT)
Ionizing Radiation Dataset (TAB)
Ionizing Radiation Gene Interaction File (TAB)

Code and Interaction Databases

RCode

FuMoSearch.R
I-GetDatasetSymbol.R
II-A-GetNetwork.R
II-B-getAracneMI.R
II-C-getRandomSubsets.R
III-A-CallFuMoSearch.R
III-B-FuMoSearchProcedure.R
III-C-ReadInHistory.R
III-D-GetBestModules.R
III-E-Quenching.R
Others.R
Others_BioXM_Network.R
Others_Get_BioXM_Network.R

Interaction Databases HTTP File Access

Interaction Databases

Documentation HTTP File Access

Documentation